C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EH-domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000220325 EHD4-001 ENSG00000103966 9606 - 15:41895939-41972578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000220325
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000220325 11.682±0.00 20.671±0.00 0.373±0.00 1.065±0.59 5.885±4.53 2.927±1.49 11.308±0.00 5.859±5.45 1.680±0.77 11.248±0.00 1.133±0.72 5.184±2.48 5.470±0.28 3.984±2.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IR CIL_0005IR_0002 CGP 15:41848144-41972578
CIL_0005F3 CIL_0005F3_0001 CGP 15:41895939-42051190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 TAS nucleic acid binding
GO:0003924 IEA GTPase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005634 TAS nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006907 IEA pinocytosis
GO:0016020 IDA membrane
GO:0030100 IEA regulation of endocytosis
GO:0032456 IGI endocytic recycling
GO:0048471 IEA perinuclear region of cytoplasm
GO:0050731 IEA positive regulation of peptidyl-tyrosine phosphorylation
GO:0051260 IPI protein homooligomerization
GO:0055038 IDA recycling endosome membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0071363 IEA cellular response to growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028755 Ehd4-001 protein_coding Mus_musculus 0 2228
ENSMUST00000025684 Ehd1-001 protein_coding Mus_musculus 0 830
ENSMUST00000148073 Ehd4-004 processed_transcript Mus_musculus 0 673
ENSDART00000076481 EHD4-001 protein_coding Danio_rerio 0 547
ENSDART00000125997 EHD4-201 protein_coding Danio_rerio 0 451
ENSMUST00000150240 Ehd4-003 processed_transcript Mus_musculus 0 420
ENSMUST00000165797 Ehd1-003 retained_intron Mus_musculus 0 298

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