C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fukutin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000223528 FKTN-001 ENSG00000106692 9606 + 9:105558130-105641118 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungOvaryPlacentaTestisENST00000223528
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Ovary Placenta Testis
ENST00000223528 0.785±0.00 0.807±0.00 0.878±0.00 0.459±0.00 0.350±0.00 0.486±0.00 0.362±0.00 0.165±0.00 0.742±0.29 0.435±0.22 0.808±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Y CIL_00033Y_0001 CGP 9:105447796-105641118
CIL_000658 CIL_000658_0001 CGP 9:105558130-105663112

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005615 TAS extracellular space
GO:0005634 IDA nucleus
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005801 IDA cis-Golgi network
GO:0007399 TAS nervous system development
GO:0007517 TAS muscle organ development
GO:0008152 IEA metabolic process
GO:0008285 IMP negative regulation of cell proliferation
GO:0016021 IEA integral component of membrane
GO:0016740 IEA transferase activity
GO:0046329 IMP negative regulation of JNK cascade
GO:0060049 NAS regulation of protein glycosylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061771 Fktn-201 protein_coding Mus_musculus 0 1642
ENSMUST00000128667 Fktn-001 protein_coding Mus_musculus 0 1642
ENSMUST00000107638 Fktn-002 nonsense_mediated_decay Mus_musculus 0 747

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