C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apolipoprotein C-III
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000227667 APOC3-001 ENSG00000110245 9606 + 11:116829892-116833072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000227667
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000227667 0.767±0.00 0.445±0.00 0.055±0.00 3.258±0.00 0.359±0.00 0.043±0.00 711.180±706.83 5624.960±0.00 0.311±0.00 0.156±0.00 0.116±0.05 0.883±0.10 0.829±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001523 TAS retinoid metabolic process
GO:0005543 IDA phospholipid binding
GO:0005576 TAS:IEA extracellular region
GO:0005615 IDA extracellular space
GO:0005769 TAS early endosome
GO:0006641 IMP triglyceride metabolic process
GO:0006642 IEA triglyceride mobilization
GO:0006869 IEA lipid transport
GO:0006954 IEA inflammatory response
GO:0007186 IDA G-protein coupled receptor signaling pathway
GO:0007584 IEA response to nutrient
GO:0007603 TAS phototransduction, visible light
GO:0008203 IEA cholesterol metabolic process
GO:0008289 IEA lipid binding
GO:0010897 IDA negative regulation of triglyceride catabolic process
GO:0010903 IC negative regulation of very-low-density lipoprotein particle remodeling
GO:0010916 IDA negative regulation of very-low-density lipoprotein particle clearance
GO:0010987 IMP negative regulation of high-density lipoprotein particle clearance
GO:0010989 IMP negative regulation of low-density lipoprotein particle clearance
GO:0015485 IC cholesterol binding
GO:0019433 IDA triglyceride catabolic process
GO:0030234 IDA enzyme regulator activity
GO:0032489 IDA regulation of Cdc42 protein signal transduction
GO:0033344 IDA cholesterol efflux
GO:0033700 IDA phospholipid efflux
GO:0034361 IDA very-low-density lipoprotein particle
GO:0034363 IDA intermediate-density lipoprotein particle
GO:0034366 IDA spherical high-density lipoprotein particle
GO:0034375 IMP high-density lipoprotein particle remodeling
GO:0034379 TAS very-low-density lipoprotein particle assembly
GO:0034382 IDA chylomicron remnant clearance
GO:0042157 IEA:TAS lipoprotein metabolic process
GO:0042493 IEA response to drug
GO:0042627 IDA chylomicron
GO:0042632 IMP cholesterol homeostasis
GO:0042953 IEA lipoprotein transport
GO:0043434 IEA response to peptide hormone
GO:0043691 IC reverse cholesterol transport
GO:0044281 TAS small molecule metabolic process
GO:0045717 IDA negative regulation of fatty acid biosynthetic process
GO:0045833 IDA negative regulation of lipid metabolic process
GO:0048261 IDA negative regulation of receptor-mediated endocytosis
GO:0050995 IDA negative regulation of lipid catabolic process
GO:0051005 IDA negative regulation of lipoprotein lipase activity
GO:0055102 IDA lipase inhibitor activity
GO:0060621 IMP negative regulation of cholesterol import
GO:0070062 IDA extracellular vesicular exosome
GO:0070328 IMP triglyceride homeostasis
GO:0070653 IPI high-density lipoprotein particle receptor binding
GO:0071333 IEA cellular response to glucose stimulus

Homologs

No Homologs available.

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