C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII) N-terminal and central domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000234827 TCEANC2-001 ENSG00000116205 9606 + 1:54053601-54099743 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000234827
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000234827 1.118±0.00 0.857±0.00 0.772±0.23 0.833±0.41 0.953±0.00 0.675±0.34 1.583±0.00 0.826±0.47 0.550±0.16 1.502±0.00 1.181±0.41 1.694±0.88 1.994±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006W5 CIL_0006W5_0002 CGP 1:54053587-54153770

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057043 Tceanc2-001 protein_coding Mus_musculus 0 1275
ENSMUST00000058585 Tceanc2-010 protein_coding Mus_musculus 0 809
ENSMUST00000030362 Tceanc2-005 protein_coding Mus_musculus 0 809
ENSMUST00000141165 Tceanc2-009 protein_coding Mus_musculus 0 669
ENSMUST00000127720 Tceanc2-004 nonsense_mediated_decay Mus_musculus 0 632
ENSMUST00000129220 Tceanc2-006 processed_transcript Mus_musculus 0 276
ENSMUST00000132526 Tceanc2-007 processed_transcript Mus_musculus 0 200
ENSMUST00000147375 Tceanc2-003 processed_transcript Mus_musculus 1e-32 147
ENSMUST00000131474 Tceanc2-002 processed_transcript Mus_musculus 2e-26 126

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