C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 77
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000235090 WDR77-001 ENSG00000116455 9606 - 1:111439890-111449376 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastKidneyOvaryPlacentaENST00000235090
Transcript ID Breast Kidney Ovary Placenta
ENST00000235090 3.490±1.78 1.889±0.00 5.851±2.85 11.290±1.59

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000387 TAS spliceosomal snRNP assembly
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005829 IDA cytosol
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0008284 IEA positive regulation of cell proliferation
GO:0008285 IEA negative regulation of cell proliferation
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0030374 IGI ligand-dependent nuclear receptor transcription coactivator activity
GO:0034660 TAS ncRNA metabolic process
GO:0034709 IDA methylosome
GO:0060528 IEA secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development
GO:0060770 IEA negative regulation of epithelial cell proliferation involved in prostate gland development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010278 Wdr77-001 protein_coding Mus_musculus 0 1327
ENSMUST00000167642 Wdr77-007 retained_intron Mus_musculus 0 1273
ENSMUST00000127464 Wdr77-003 retained_intron Mus_musculus 0 985
ENSMUST00000130994 Wdr77-002 nonsense_mediated_decay Mus_musculus 0 924
ENSMUST00000128005 Wdr77-006 protein_coding Mus_musculus 0 824

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