C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein interacting protein 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000244221 PAIP2B-001 ENSG00000124374 9606 - 2:71182739-71227083 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000244221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000244221 1.446±0.00 1.316±0.00 4.559±0.00 12.956±2.50 1.612±0.11 2.364±0.68 12.588±4.72 5.272±0.97 3.294±0.51 2.036±0.76 12.119±1.87 2.170±0.40 0.268±0.12 1.635±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003C3 CIL_0003C3_0001 CGP 2:71182739-71435069

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000900 IDA translation repressor activity, nucleic acid binding
GO:0005515 IPI protein binding
GO:0005737 IC cytoplasm
GO:0045947 IDA negative regulation of translational initiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058383 Paip2b-001 protein_coding Mus_musculus 0 529
ENSMUST00000145593 Paip2b-003 processed_transcript Mus_musculus 0 385
ENSMUST00000125493 Paip2b-004 processed_transcript Mus_musculus 0 346

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