C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: alanyl-tRNA synthetase 2, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000244571 AARS2-001 ENSG00000124608 9606 - 6:44299654-44313326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000244571
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000244571 2.286±0.00 1.143±0.00 0.841±0.00 0.596±0.19 0.815±0.00 1.143±0.00 1.698±0.00 1.070±0.16 2.430±1.85 1.741±0.22 5.516±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DS CIL_0008DS_0001 VISTA 6:44250447-44853640
CIL_000295 CIL_000295_0002 CGP 6:44258166-44307506
CIL_000294 CIL_000294_0002 CGP 6:44273194-44378957

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000049 IEA tRNA binding
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0004813 IMP:IEA alanine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0006418 TAS tRNA aminoacylation for protein translation
GO:0006419 IEA alanyl-tRNA aminoacylation
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0016876 IEA ligase activity, forming aminoacyl-tRNA and related compounds
GO:0033108 IMP mitochondrial respiratory chain complex assembly
GO:0043039 IEA tRNA aminoacylation
GO:0070143 IMP mitochondrial alanyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024733 Aars2-201 protein_coding Mus_musculus 0 2724
ENSMUST00000053033 D1Ertd622e-001 protein_coding Mus_musculus 0.0000000000003 82

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