C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 4, subfamily F, polypeptide 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248041 CYP4F11-004 ENSG00000171903 9606 - 19:15912367-15934867 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverOvaryTestisENST00000248041
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Ovary Testis
ENST00000248041 0.220±0.00 0.254±0.00 1.352±0.99 0.132±0.00 1.035±0.00 2.523±0.99 15.143±0.00 0.568±0.40 0.138±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006805 TAS xenobiotic metabolic process
GO:0006954 TAS inflammatory response
GO:0007596 TAS blood coagulation
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016709 IDA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0020037 IEA:TAS heme binding
GO:0042361 IDA menaquinone catabolic process
GO:0042376 IDA phylloquinone catabolic process
GO:0042377 IDA vitamin K catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA:TAS oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000054174 Cyp4f14-201 protein_coding Mus_musculus 0 1223
ENSMUST00000179434 Cyp4f14-202 protein_coding Mus_musculus 0 1223
ENSMUST00000008801 Cyp4f15-002 protein_coding Mus_musculus 0 1212
ENSMUST00000168171 Cyp4f15-001 protein_coding Mus_musculus 0 1114
ENSMUST00000165061 Cyp4f40-201 protein_coding Mus_musculus 0 1109
ENSMUST00000003574 Cyp4f18-001 protein_coding Mus_musculus 0 1002
ENSMUST00000165999 Cyp4f17-201 protein_coding Mus_musculus 0 985
ENSMUST00000075253 Cyp4f13-001 protein_coding Mus_musculus 0 974
ENSMUST00000003416 Cyp4f16-003 protein_coding Mus_musculus 0 883
ENSMUST00000169591 Cyp4f16-001 protein_coding Mus_musculus 0 883
ENSMUST00000165515 Cyp4f16-002 nonsense_mediated_decay Mus_musculus 0 881
ENSMUST00000077639 Cyp4f37-201 protein_coding Mus_musculus 0 848
ENSMUST00000137222 Cyp4f13-004 nonsense_mediated_decay Mus_musculus 0 752
ENSMUST00000139353 Cyp4f13-002 protein_coding Mus_musculus 0 752
ENSMUST00000168346 Cyp4f16-004 retained_intron Mus_musculus 0 569
ENSMUST00000169252 Cyp4f16-005 nonsense_mediated_decay Mus_musculus 0 492
ENSMUST00000168285 Cyp4f16-009 retained_intron Mus_musculus 0 433
ENSMUST00000141975 Cyp4f18-003 processed_transcript Mus_musculus 0 359
ENSMUST00000125448 Cyp4f18-002 processed_transcript Mus_musculus 0 353
ENSMUST00000170956 Cyp4f16-007 processed_transcript Mus_musculus 0 296
ENSMUST00000163736 Cyp4f16-008 retained_intron Mus_musculus 0 243
ENSMUST00000141325 Cyp4f13-006 nonsense_mediated_decay Mus_musculus 0 204
ENSMUST00000126790 Cyp4f41-ps-001 unprocessed_pseudogene Mus_musculus 1e-20 106
ENSMUST00000123653 Cyp4f13-007 retained_intron Mus_musculus 0.000000002 69

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