C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: angio-associated, migratory cell protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000248450 AAMP-001 ENSG00000127837 9606 - 2:218264123-218270257 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000248450
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000248450 17.710±0.00 11.264±0.00 2.266±0.00 8.834±2.95 7.797±6.93 7.787±6.10 6.410±6.00 8.801±4.44 5.086±3.19 10.390±9.27 22.750±0.00 26.026±14.37 38.344±7.26 24.162±5.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VK CIL_0005VK_0001 CGP 2:218259496-218270257
CIL_0005VJ CIL_0005VJ_0001 CGP 2:218264123-218346793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001525 NAS angiogenesis
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0008201 TAS heparin binding
GO:0009986 IDA cell surface
GO:0010595 ISS positive regulation of endothelial cell migration
GO:0014909 IEP smooth muscle cell migration
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006462 Aamp-001 protein_coding Mus_musculus 0 2108
ENSMUST00000178235 Aamp-002 protein_coding Mus_musculus 0 2004
ENSMUST00000186833 Aamp-003 retained_intron Mus_musculus 0 822
ENSMUST00000191258 Aamp-006 retained_intron Mus_musculus 0 708

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