C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254029 WDR44-001 ENSG00000131725 9606 + X:118346109-118449961 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254029 2.711±0.00 1.762±0.00 0.799±0.00 4.155±1.10 1.083±0.60 2.721±0.09 1.494±0.13 0.488±0.00 1.900±1.02 2.268±0.00 1.520±0.00 2.054±0.54 1.772±0.35 4.189±1.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000713 CIL_000713_0001 CGP X:117897813-118449961

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005768 IEA endosome
GO:0005794 IEA Golgi apparatus
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035766 Wdr44-002 protein_coding Mus_musculus 0 4867
ENSMUST00000101670 Wdr44-001 protein_coding Mus_musculus 0 4826
ENSMUST00000149483 Wdr44-005 nonsense_mediated_decay Mus_musculus 0 599
ENSMUST00000135445 Wdr44-004 retained_intron Mus_musculus 0 472
ENSMUST00000142600 Wdr44-003 retained_intron Mus_musculus 0 333
ENSMUST00000119548 Gm14554-001 unprocessed_pseudogene Mus_musculus 0 331

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