C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WW domain binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254806 WBP2-201 ENSG00000132471 9606 - 17:75845699-75855420 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254806
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254806 44.229±0.00 35.998±0.00 2.151±0.00 51.337±26.61 10.657±9.25 16.158±15.14 15.024±13.72 16.047±8.50 13.478±11.93 24.553±22.29 41.236±35.29 37.807±37.38 35.458±18.60 39.572±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WF CIL_0008WF_0001 VISTA 17:75822026-76422503
CIL_00078T CIL_00078T_0001 CGP 17:75827225-75856507
CIL_00078U CIL_00078U_0001 CGP 17:75845699-75878575

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000790 IDA nuclear chromatin
GO:0000979 IMP RNA polymerase II core promoter sequence-specific DNA binding
GO:0001105 IMP RNA polymerase II transcription coactivator activity
GO:0005515 IPI protein binding
GO:0031490 IMP chromatin DNA binding
GO:0045184 IMP establishment of protein localization
GO:0045815 IMP positive regulation of gene expression, epigenetic
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0071391 IMP cellular response to estrogen stimulus
GO:0071442 IMP positive regulation of histone H3-K14 acetylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074628 Wbp2-001 protein_coding Mus_musculus 0 1127
ENSMUST00000145278 Wbp2-005 processed_transcript Mus_musculus 0 673
ENSMUST00000106444 Wbp2-002 protein_coding Mus_musculus 0 586
ENSMUST00000146339 Wbp2-004 processed_transcript Mus_musculus 0 466
ENSMUST00000121459 Gm15362-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000129532 Wbp2-003 processed_transcript Mus_musculus 0 291
ENSMUST00000119778 Gm14213-001 processed_pseudogene Mus_musculus 0 231

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