C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heat-responsive protein 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000254878 HRSP12-001 ENSG00000132541 9606 - 8:98102344-98117241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000254878
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000254878 10.008±0.00 2.267±0.00 15.719±0.00 11.650±0.78 4.566±1.59 3.237±1.50 5.096±2.10 86.595±48.92 73.076±71.33 3.355±0.38 2.757±1.77 8.210±3.95 3.284±1.35 7.638±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00028O CIL_00028O_0001 CGP 8:98064311-98117241
CIL_000684 CIL_000684_0001 CGP 8:98102344-98159834

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004519 IEA endonuclease activity
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0005739 IEA mitochondrion
GO:0006449 TAS regulation of translational termination
GO:0019239 IEA deaminase activity
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome
GO:0090305 IEA nucleic acid phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022946 Hrsp12-001 protein_coding Mus_musculus 0 473
ENSMUST00000141154 Hrsp12-004 retained_intron Mus_musculus 0 438
ENSMUST00000129426 Hrsp12-003 processed_transcript Mus_musculus 0 326
ENSMUST00000125286 Hrsp12-002 retained_intron Mus_musculus 0 278

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