C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosducin-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000259467 PDCL-002 ENSG00000136940 9606 - 9:122818344-122828631 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000259467
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000259467 9.815±0.00 6.618±0.00 2.089±0.00 4.123±0.86 5.329±0.22 4.035±0.42 1.581±0.32 3.107±1.25 3.056±2.25 5.926±1.51 0.924±0.46 5.607±1.46 6.237±2.28 5.817±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WL CIL_0006WL_0001 CGP 9:122788933-122828631

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005057 TAS receptor signaling protein activity
GO:0005737 IDA cytoplasm
GO:0006457 IEA protein folding
GO:0007165 NAS signal transduction
GO:0007601 IEA visual perception
GO:0008277 TAS regulation of G-protein coupled receptor protein signaling pathway
GO:0032403 IEA protein complex binding
GO:0035556 TAS intracellular signal transduction
GO:0061084 IEA negative regulation of protein refolding
GO:1902605 IEA heterotrimeric G-protein complex assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009174 Pdcl-001 protein_coding Mus_musculus 0 1445
ENSMUST00000112940 Pdcl-002 protein_coding Mus_musculus 0 1443
ENSMUST00000147703 Pdcl-003 protein_coding Mus_musculus 0 712
ENSMUST00000138314 Pdcl-004 processed_transcript Mus_musculus 0 595

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