C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BUD13 homolog (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000260210 BUD13-001 ENSG00000137656 9606 - 11:116748170-116772988 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000260210
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000260210 4.872±0.00 2.440±0.00 1.251±0.62 2.092±0.94 3.214±0.00 1.313±0.74 1.932±1.13 1.961±0.07 6.413±0.00 4.092±3.89 7.596±3.64 5.802±0.80 11.905±1.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EK CIL_0008EK_0001 VISTA 11:116351165-116951910
CIL_0007RC CIL_0007RC_0001 VISTA 11:116660805-117262910

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000398 ISS mRNA splicing, via spliceosome
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006406 ISS mRNA export from nucleus
GO:0044822 IDA poly(A) RNA binding
GO:0070274 ISS RES complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074957 Bud13-001 protein_coding Mus_musculus 0 1068
ENSMUST00000138498 Bud13-002 retained_intron Mus_musculus 0 931
ENSMUST00000154247 Bud13-003 retained_intron Mus_musculus 0 302

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