C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: disrupted in renal carcinoma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261038 DIRC2-001 ENSG00000138463 9606 + 3:122794795-122881139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261038 1.981±0.00 0.848±0.00 2.199±0.00 1.741±0.23 1.990±0.00 1.425±0.95 1.843±0.01 0.873±0.10 2.177±1.68 1.407±0.29 3.385±0.00 1.065±0.32 4.199±0.93 1.112±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008J4 CIL_0008J4_0001 VISTA 3:122671455-123276444
CIL_0005BJ CIL_0005BJ_0002 CGP 3:122740003-122881139
CIL_0005BK CIL_0005BK_0002 CGP 3:122794795-123028605

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005764 IEA lysosome
GO:0006810 IEA transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023554 Dirc2-001 protein_coding Mus_musculus 0 1838
ENSMUST00000149892 Dirc2-002 nonsense_mediated_decay Mus_musculus 0 1273

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