C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleoporin 133kDa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261396 NUP133-001 ENSG00000069248 9606 - 1:229440260-229508341 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000261396
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000261396 5.882±0.00 3.787±2.85 3.552±1.97 3.912±0.57 3.557±1.56 4.427±2.89 0.734±0.43 6.464±0.00 3.917±2.68 8.288±2.29 8.199±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RY CIL_0005RY_0001 CGP 1:229431245-229508341
CIL_0005RX CIL_0005RX_0001 CGP 1:229440260-229558695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000777 IDA condensed chromosome kinetochore
GO:0000940 IDA condensed chromosome outer kinetochore
GO:0005487 IDA nucleocytoplasmic transporter activity
GO:0005515 IPI protein binding
GO:0005635 TAS nuclear envelope
GO:0005643 IDA nuclear pore
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006406 IDA mRNA export from nucleus
GO:0006999 IMP nuclear pore organization
GO:0007077 TAS mitotic nuclear envelope disassembly
GO:0008645 TAS hexose transport
GO:0010827 TAS regulation of glucose transport
GO:0015031 IEA protein transport
GO:0015758 TAS glucose transport
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0031080 IDA nuclear pore outer ring
GO:0044281 TAS small molecule metabolic process
GO:0048339 IEA paraxial mesoderm development
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000044795 Nup133-201 protein_coding Mus_musculus 0 2684

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