C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin alpha 3 (importin alpha 4)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261667 KPNA3-001 ENSG00000102753 9606 - 13:49699307-49792921 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261667
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261667 11.477±0.00 9.032±0.00 1.081±0.00 8.832±3.41 8.598±4.58 10.012±4.73 9.210±5.54 5.173±0.00 6.025±1.10 7.006±0.23 26.679±18.62 8.985±5.01 6.033±2.24 20.850±2.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005L8 CIL_0005L8_0002 CGP 13:49660723-49792921
CIL_0005L2 CIL_0005L2_0002 CGP 13:49699307-49936490

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005643 TAS nuclear pore
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006461 TAS protein complex assembly
GO:0006606 IEA protein import into nucleus
GO:0006607 TAS NLS-bearing protein import into nucleus
GO:0008022 IEA protein C-terminus binding
GO:0008139 TAS nuclear localization sequence binding
GO:0008565 IEA protein transporter activity
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0046718 IEA viral entry into host cell
GO:0075732 IEA viral penetration into host nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022496 Kpna3-201 protein_coding Mus_musculus 0 5498

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