C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: enhancer of polycomb homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263062 EPC1-004 ENSG00000120616 9606 - 10:32268931-32347185 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000263062
Transcript ID Bladder Brain Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000263062 3.323±0.00 1.029±0.00 2.322±0.00 0.402±0.00 2.668±0.00 3.090±0.00 2.047±0.19 3.152±1.85 2.404±1.47 3.057±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XJ CIL_0000XJ_0002 CGP 10:32009010-32378798

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0004402 IDA histone acetyltransferase activity
GO:0005634 IDA nucleus
GO:0005654 IDA nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006351 TAS transcription, DNA-templated
GO:0031965 IDA nuclear membrane
GO:0032777 IDA Piccolo NuA4 histone acetyltransferase complex
GO:0035267 IDA NuA4 histone acetyltransferase complex
GO:0040008 IEA regulation of growth
GO:0043967 IDA histone H4 acetylation
GO:0043968 IDA histone H2A acetylation
GO:0045814 IDA negative regulation of gene expression, epigenetic
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 TAS positive regulation of transcription, DNA-templated
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000028100 Epc1-002 protein_coding Mus_musculus 0 2671
ENSMUST00000115870 Epc1-001 protein_coding Mus_musculus 0 2034
ENSMUST00000124926 Epc1-004 protein_coding Mus_musculus 0 688
ENSMUST00000050542 Epc1-003 protein_coding Mus_musculus 0 643
ENSDART00000084223 EPC1 (2 of 2)-201 protein_coding Danio_rerio 0 560
ENSDART00000033072 epc1-201 protein_coding Danio_rerio 0 422

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