C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: BarH-like homeobox 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263610 BARHL1-001 ENSG00000125492 9606 + 9:132582185-132590266 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastHeartLungOvaryPlacentaTestisENST00000263610
Transcript ID Adrenal Breast Heart Lung Ovary Placenta Testis
ENST00000263610 0.018±0.00 0.073±0.00 0.019±0.00 0.058±0.00 0.044±0.02 0.041±0.00 0.036±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001077 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0001764 IEA neuron migration
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007605 IEA sensory perception of sound
GO:0030901 IEA midbrain development
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000050776 Barhl1-001 protein_coding Mus_musculus 0 2076
ENSMUST00000113847 Barhl1-002 protein_coding Mus_musculus 0 1958
ENSMUST00000113849 Barhl1-003 protein_coding Mus_musculus 0 1958
ENSMUST00000174027 Barhl1-005 processed_transcript Mus_musculus 0 1134
ENSMUST00000124059 Barhl1-004 processed_transcript Mus_musculus 0 802

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