C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: formin binding protein 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000263773 FNBP4-001 ENSG00000109920 9606 - 11:47716517-47767301 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263773
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263773 3.778±0.00 13.887±0.00 2.306±0.00 3.775±1.40 2.975±0.09 2.769±0.72 2.324±0.00 4.025±0.00 2.005±1.04 6.423±3.69 3.201±0.00 6.999±2.14 3.438±0.54 5.038±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002LN CIL_0002LN_0002 CGP 11:47659591-47767443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000013759 Fnbp4-001 protein_coding Mus_musculus 0 3149
ENSMUST00000123314 Fnbp4-002 processed_transcript Mus_musculus 0 1509
ENSMUST00000145747 Fnbp4-004 processed_transcript Mus_musculus 0 623
ENSMUST00000141672 Fnbp4-005 processed_transcript Mus_musculus 0 553
ENSMUST00000152794 Fnbp4-003 processed_transcript Mus_musculus 0 501
ENSMUST00000135592 Fnbp4-006 processed_transcript Mus_musculus 0 457
ENSMUST00000126829 Fnbp4-007 processed_transcript Mus_musculus 0 427
ENSMUST00000142631 Fnbp4-009 processed_transcript Mus_musculus 0 418
ENSMUST00000123955 Fnbp4-008 processed_transcript Mus_musculus 0 370
ENSMUST00000119075 Gm14103-001 processed_pseudogene Mus_musculus 0 296

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