C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mucolipin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264079 MCOLN1-001 ENSG00000090674 9606 + 19:7522626-7534009 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000264079
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000264079 7.846±0.00 11.450±0.00 14.446±0.00 6.260±5.05 7.407±0.00 10.261±0.00 17.134±0.00 6.987±4.87 9.732±6.40 20.164±0.00 13.577±1.65 22.642±5.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00043C CIL_00043C_0001 CGP 19:7515292-7534009

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005261 NAS cation channel activity
GO:0005737 IDA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005886 IDA plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006812 NAS cation transport
GO:0006879 TAS cellular iron ion homeostasis
GO:0010008 TAS endosome membrane
GO:0016021 NAS integral component of membrane
GO:0033572 TAS transferrin transport
GO:0034220 TAS ion transmembrane transport
GO:0043235 IDA receptor complex
GO:0051209 IEA release of sequestered calcium ion into cytosol
GO:0055085 TAS transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport
GO:0072345 IEA NAADP-sensitive calcium-release channel activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000004683 Mcoln1-001 protein_coding Mus_musculus 0 1945
ENSMUST00000162797 Mcoln1-002 retained_intron Mus_musculus 0 704
ENSMUST00000159808 Mcoln1-005 retained_intron Mus_musculus 0 553
ENSMUST00000161842 Mcoln1-006 retained_intron Mus_musculus 0 379
ENSMUST00000159538 Mcoln1-004 retained_intron Mus_musculus 0 370
ENSMUST00000160338 Mcoln1-003 protein_coding Mus_musculus 0 270
ENSMUST00000098524 Mcoln2-002 protein_coding Mus_musculus 1e-29 135
ENSMUST00000011152 Mcoln2-001 protein_coding Mus_musculus 1e-29 135
ENSMUST00000170972 Mcoln2-005 protein_coding Mus_musculus 1e-20 106

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