C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4 gamma, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264211 EIF4G3-001 ENSG00000075151 9606 - 1:20806470-21050994 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264211
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264211 4.349±0.00 5.798±0.00 1.285±0.00 4.481±1.88 5.389±0.00 6.010±2.03 2.689±1.49 4.195±2.04 1.982±0.75 5.074±0.00 5.412±4.41 4.589±2.74 3.952±2.81 46.426±24.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002W8 CIL_0002W8_0002 CGP 1:20806292-21345504

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000339 TAS RNA cap binding
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005829 TAS cytosol
GO:0006413 IEA translational initiation
GO:0006446 TAS regulation of translational initiation
GO:0008135 TAS translation factor activity, nucleic acid binding
GO:0016032 IEA viral process
GO:0016281 TAS eukaryotic translation initiation factor 4F complex
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084215 Eif4g3-001 protein_coding Mus_musculus 0 5662
ENSMUST00000105831 Eif4g3-202 protein_coding Mus_musculus 0 3480
ENSMUST00000084214 Eif4g3-201 protein_coding Mus_musculus 0 3297
ENSMUST00000140796 Eif4g3-008 protein_coding Mus_musculus 0 2004
ENSMUST00000133902 Eif4g3-009 processed_transcript Mus_musculus 0 1666
ENSMUST00000105830 Eif4g3-002 protein_coding Mus_musculus 0 1301
ENSMUST00000139759 Eif4g3-007 protein_coding Mus_musculus 0 869
ENSMUST00000058133 Eif4g3-003 protein_coding Mus_musculus 0 699
ENSDART00000087110 eif4g3b-201 protein_coding Danio_rerio 0 556
ENSDART00000145172 eif4g3b-001 protein_coding Danio_rerio 0 556
ENSMUST00000155142 Eif4g3-004 protein_coding Mus_musculus 0 484
ENSDART00000111576 EIF4G3 (2 of 2)-201 protein_coding Danio_rerio 0 316
ENSMUST00000148074 Eif4g3-012 processed_transcript Mus_musculus 0 309

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