C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 12 open reading frame 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267103 C12orf10-001 ENSG00000139637 9606 + 12:53299686-53307158 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267103
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267103 30.192±0.00 31.500±0.00 1.092±0.00 12.648±7.98 11.333±8.97 18.470±16.49 5.668±4.80 17.332±15.11 12.879±6.19 12.518±9.86 20.116±14.35 24.130±16.84 29.497±4.11 97.788±1.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060P CIL_00060P_0001 CGP 12:53295291-53307177
CIL_00060Q CIL_00060Q_0001 CGP 12:53299686-53324864

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0035641 IEA locomotory exploration behavior
GO:0043473 NAS pigmentation
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113682 Myg1-001 protein_coding Mus_musculus 0 1168
ENSMUST00000170078 Myg1-002 retained_intron Mus_musculus 0 950
ENSMUST00000164961 Myg1-009 retained_intron Mus_musculus 0 730
ENSMUST00000171244 Myg1-010 protein_coding Mus_musculus 0 651
ENSMUST00000171733 Myg1-005 retained_intron Mus_musculus 0 636
ENSMUST00000001331 Myg1-003 protein_coding Mus_musculus 0 525
ENSMUST00000168547 Myg1-008 retained_intron Mus_musculus 0 516
ENSMUST00000170713 Myg1-007 retained_intron Mus_musculus 0 307
ENSMUST00000164019 Myg1-006 processed_transcript Mus_musculus 0 267
ENSMUST00000170281 Myg1-004 retained_intron Mus_musculus 0 255

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