C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NOP9 nucleolar protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267425 NOP9-004 ENSG00000196943 9606 + 14:24299862-24309124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267425
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267425 6.080±0.00 3.760±0.00 0.883±0.00 3.715±2.85 5.001±0.00 2.775±1.30 2.619±2.30 5.544±0.00 0.713±0.00 3.550±0.00 5.245±4.76 3.819±2.08 4.180±1.02 4.283±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002CE CIL_0002CE_0001 CGP 14:24290598-24309124
CIL_0002D8 CIL_0002D8_0001 CGP 14:24299862-24311430

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019441 Nop9-001 protein_coding Mus_musculus 0 1784
ENSMUST00000136270 Cideb-002 retained_intron Mus_musculus 0 300
ENSMUST00000001497 Cideb-001 protein_coding Mus_musculus 8e-36 158

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