C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: microfibrillar-associated protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000267812 MFAP1-001 ENSG00000140259 9606 - 15:43804492-43824802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000267812
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000267812 7.716±0.00 8.728±0.00 2.227±0.00 6.683±3.68 5.068±4.03 6.256±5.12 3.588±2.96 9.285±7.97 3.544±0.66 5.242±2.23 5.084±0.00 11.401±5.67 16.843±7.08 20.642±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WI CIL_0007WI_0001 VISTA 15:43579049-44181693
CIL_00067W CIL_00067W_0001 CGP 15:43796142-43824802
CIL_00075U CIL_00075U_0001 CGP 15:43804492-43868419

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001527 IDA microfibril
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0008150 ND biological_process
GO:0030198 TAS extracellular matrix organization
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089926 Mfap1a-001 protein_coding Mus_musculus 0 1816
ENSMUST00000056732 Mfap1b-001 protein_coding Mus_musculus 0 1816
ENSMUST00000121539 Gm12430-001 processed_pseudogene Mus_musculus 0 1659
ENSMUST00000121030 Gm12804-001 processed_pseudogene Mus_musculus 0 854

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