C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 8A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272217 ARL8A-001 ENSG00000143862 9606 - 1:202133404-202144741 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000272217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000272217 34.648±0.00 23.893±0.00 2.840±0.00 32.403±20.60 13.985±11.64 12.386±9.79 8.991±6.16 20.350±0.00 8.310±4.99 18.664±13.34 11.291±8.95 20.291±14.29 32.662±4.51 17.785±5.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M5 CIL_0001M5_0002 CGP 1:202007945-202133592
CIL_0001M6 CIL_0001M6_0002 CGP 1:202122858-202144743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 NAS:IEA GTPase activity
GO:0004871 IEA signal transducer activity
GO:0005525 IDA:IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IDA:IEA cytoplasm
GO:0005765 IDA lysosomal membrane
GO:0005768 IEA endosome
GO:0006184 NAS GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0007059 ISS chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0019001 IEA guanyl nucleotide binding
GO:0030496 IDA midbody
GO:0031683 IEA G-protein beta/gamma-subunit complex binding
GO:0043014 ISS alpha-tubulin binding
GO:0048487 ISS beta-tubulin binding
GO:0051233 IDA spindle midzone
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000027684 Arl8a-001 protein_coding Mus_musculus 0 1426
ENSMUST00000125774 Arl8a-003 protein_coding Mus_musculus 0 1002
ENSDART00000149320 arl8a-001 protein_coding Danio_rerio 0 573
ENSDART00000113957 arl8a-201 protein_coding Danio_rerio 0 551
ENSDART00000103076 arl8bb-201 protein_coding Danio_rerio 0 326
ENSMUST00000141177 Arl8a-002 retained_intron Mus_musculus 0 294

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