C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: unc-80 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000272845 UNC80-007 ENSG00000144406 9606 + 2:209772039-209999296 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyOvaryPlacentaTestisENST00000272845
Transcript ID Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000272845 0.995±0.03 0.047±0.00 0.019±0.00 0.016±0.00 0.078±0.07 0.029±0.00 0.491±0.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000136 CIL_000136_0001 CGP 2:209424058-209999300
CIL_0006P1 CIL_0006P1_0001 CGP 2:209771993-210022259

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0034220 TAS ion transmembrane transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000061620 Unc80-001 protein_coding Mus_musculus 0 6191
ENSMUST00000152844 Unc80-002 protein_coding Mus_musculus 0 1086
ENSMUST00000114008 Unc80-004 nonsense_mediated_decay Mus_musculus 0 1085
ENSMUST00000136727 Unc80-003 retained_intron Mus_musculus 0 1066
ENSDART00000156183 UNC80 (1 of 2)-001 protein_coding Danio_rerio 0 852
ENSDART00000156076 UNC80 (2 of 2)-001 protein_coding Danio_rerio 0 387
ENSMUST00000187179 Unc80-005 retained_intron Mus_musculus 0 237

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