C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: trace amine associated receptor 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000275198 TAAR6-001 ENSG00000146383 9606 + 6:132570322-132571359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverENST00000275198
Transcript ID Brain Heart Liver
ENST00000275198 0.067±0.00 0.115±0.00 0.227±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001EC CIL_0001EC_002A CGP 6:132552693-132571359
CIL_0001EC CIL_0001EC_0029 CGP 6:132570322-132589686

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001594 IEA trace-amine receptor activity
GO:0004930 TAS:IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057080 Taar6-001 protein_coding Mus_musculus 0 1029
ENSMUST00000071691 Taar7f-001 protein_coding Mus_musculus 0 396
ENSMUST00000092656 Taar7e-001 protein_coding Mus_musculus 0 396
ENSMUST00000092657 Taar7d-001 protein_coding Mus_musculus 0 396
ENSMUST00000122123 Taar7c-ps-001 unprocessed_pseudogene Mus_musculus 0 320
ENSDART00000125958 taar18c-201 protein_coding Danio_rerio 0.000005 57
ENSDART00000136031 taar18f-001 protein_coding Danio_rerio 0.000005 57

Loading