C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon, kappa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000276943 IFNK-001 ENSG00000147896 9606 + 9:27524314-27526498 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000276943
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000276943 0.076±0.00 0.140±0.00 0.239±0.21 0.027±0.00 0.391±0.00 0.044±0.02 0.197±0.00 0.096±0.09 0.179±0.00 0.094±0.00 0.218±0.19 0.029±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00061M CIL_00061M_0001 CGP 9:27325209-27529781
CIL_00061J CIL_00061J_0001 CGP 9:27524314-27573866

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002250 IBA adaptive immune response
GO:0002286 IBA T cell activation involved in immune response
GO:0002323 IBA natural killer cell activation involved in immune response
GO:0005125 IBA cytokine activity
GO:0005126 IEA cytokine receptor binding
GO:0005132 IDA type I interferon receptor binding
GO:0005576 IC:IEA extracellular region
GO:0005615 IBA extracellular space
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006952 IEA defense response
GO:0006959 IBA humoral immune response
GO:0008285 NAS negative regulation of cell proliferation
GO:0009615 IEP response to virus
GO:0019221 IDA cytokine-mediated signaling pathway
GO:0030101 NAS natural killer cell activation
GO:0030183 IBA B cell differentiation
GO:0033141 IBA positive regulation of peptidyl-serine phosphorylation of STAT protein
GO:0042100 IBA B cell proliferation
GO:0043330 IBA response to exogenous dsRNA
GO:0045087 IBA innate immune response
GO:0045089 TAS positive regulation of innate immune response
GO:0045343 IBA regulation of MHC class I biosynthetic process
GO:0051607 IEA defense response to virus

Homologs

No Homologs available.

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