C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cardiotrophin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000279804 CTF1-001 ENSG00000150281 9606 + 16:30896607-30903560 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000279804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000279804 1.984±0.00 0.233±0.00 1.292±0.00 1.617±0.00 0.875±0.00 0.475±0.00 1.641±0.00 0.575±0.00 0.470±0.00 2.818±0.00 4.115±1.89 1.445±0.81 1.438±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QR CIL_0001QR_0001 CGP 16:30833626-30903560

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005125 IEA cytokine activity
GO:0005146 IEA leukemia inhibitory factor receptor binding
GO:0005576 TAS extracellular region
GO:0005615 IEA extracellular space
GO:0007267 TAS cell-cell signaling
GO:0007399 TAS nervous system development
GO:0007517 TAS muscle organ development
GO:0008283 TAS cell proliferation
GO:0008284 TAS positive regulation of cell proliferation
GO:0048666 IEA neuron development
GO:0048861 IEA leukemia inhibitory factor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116286 Stk40-201 protein_coding Mus_musculus 0.00003 55
ENSMUST00000127092 Stk40-002 processed_transcript Mus_musculus 0.00003 55

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