C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: K(lysine) acetyltransferase 6B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000287239 KAT6B-003 ENSG00000156650 9606 + 10:74826625-75032622 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000287239
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000287239 0.352±0.00 0.849±0.00 0.965±0.00 0.472±0.07 1.603±0.00 0.895±0.00 0.993±0.40 0.609±0.14 0.934±0.58 0.711±0.00 0.996±0.00 1.017±0.46 0.563±0.18 2.199±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00008R CIL_00008R_0001 CGP 10:74151185-75032622
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_00082Q CIL_00082Q_0001 VISTA 10:74453403-75054923
CIL_0007II CIL_0007II_0001 CGP 10:74825582-75058514

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0003677 IEA DNA binding
GO:0004402 IDA histone acetyltransferase activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS:IEA nucleosome assembly
GO:0006351 IEA transcription, DNA-templated
GO:0006355 NAS:IEA regulation of transcription, DNA-templated
GO:0008134 IDA transcription factor binding
GO:0008270 IEA zinc ion binding
GO:0016407 IDA acetyltransferase activity
GO:0016573 IDA histone acetylation
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0043966 IDA histone H3 acetylation
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0070776 IDA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069648 Kat6b-201 protein_coding Mus_musculus 0 6818
ENSMUST00000182964 Kat6b-003 protein_coding Mus_musculus 0 6818
ENSMUST00000182405 Kat6b-001 protein_coding Mus_musculus 0 6420
ENSMUST00000182855 Kat6b-002 protein_coding Mus_musculus 0 6351
ENSMUST00000187624 RP23-356O13.1-001 processed_pseudogene Mus_musculus 0 1725
ENSMUST00000188339 RP23-207H22.4-001 processed_pseudogene Mus_musculus 0 1633
ENSMUST00000182732 Kat6b-009 retained_intron Mus_musculus 0 1347
ENSMUST00000096222 Kat6b-006 retained_intron Mus_musculus 0 1319
ENSMUST00000183055 Kat6b-011 retained_intron Mus_musculus 0 1306
ENSMUST00000182553 Kat6b-010 retained_intron Mus_musculus 0 1290
ENSMUST00000183228 Kat6b-005 retained_intron Mus_musculus 0 867
ENSMUST00000182859 Kat6b-004 retained_intron Mus_musculus 0 867
ENSMUST00000112458 Kat6b-202 protein_coding Mus_musculus 0 638
ENSMUST00000183201 Kat6b-008 processed_transcript Mus_musculus 0 503
ENSMUST00000182996 Kat6b-007 protein_coding Mus_musculus 0 435
ENSDART00000077775 kat6b-201 protein_coding Danio_rerio 2e-23 117
ENSMUST00000110696 Kat6a-002 protein_coding Mus_musculus 0.00000000000005 86
ENSMUST00000044331 Kat6a-001 protein_coding Mus_musculus 0.00000000000005 86

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