C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: galactosidase, beta 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295759 GLB1L-001 ENSG00000163521 9606 - 2:219236606-219245472 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyOvaryPlacentaTestisENST00000295759
Transcript ID Kidney Ovary Placenta Testis
ENST00000295759 15.042±0.00 4.898±0.00 5.791±0.00 30.346±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000916 CIL_000916_0001 VISTA 2:219106772-219707284
CIL_0006EI CIL_0006EI_0001 CGP 2:219209772-219236669
CIL_000416 CIL_000416_0002 CGP 2:219229757-219245478
CIL_0006EH CIL_0006EH_0001 CGP 2:219236606-219250337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004553 IEA hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0004565 IEA beta-galactosidase activity
GO:0005576 IEA extracellular region
GO:0005975 IEA carbohydrate metabolic process
GO:0009341 IEA beta-galactosidase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113623 Glb1l-001 protein_coding Mus_musculus 0 1995
ENSMUST00000155716 Glb1l-002 nonsense_mediated_decay Mus_musculus 0 1995
ENSMUST00000132507 Glb1l-004 retained_intron Mus_musculus 0 1578
ENSMUST00000189663 Glb1l-009 nonsense_mediated_decay Mus_musculus 0 1184
ENSMUST00000186173 Glb1l-008 protein_coding Mus_musculus 0 1181
ENSMUST00000185448 Glb1l-011 protein_coding Mus_musculus 0 619
ENSMUST00000146713 Glb1l-005 retained_intron Mus_musculus 0 486
ENSMUST00000131408 Glb1l-003 retained_intron Mus_musculus 0 289
ENSMUST00000143193 Glb1l-007 retained_intron Mus_musculus 0 235
ENSMUST00000185449 Glb1l-010 retained_intron Mus_musculus 0 220

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