C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathelicidin antimicrobial peptide
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296435 CAMP-001 ENSG00000164047 9606 + 3:48223347-48225491 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000296435
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000296435 0.078±0.00 0.750±0.00 0.063±0.00 0.209±0.00 0.584±0.00 0.106±0.00 0.133±0.02 1.033±0.95 16.645±16.20 0.175±0.03 0.939±0.70 87.599±86.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007U6 CIL_0007U6_0001 VISTA 3:47843366-48458182

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0002227 IDA innate immune response in mucosa
GO:0005515 IPI protein binding
GO:0005576 IEA extracellular region
GO:0005615 IDA extracellular space
GO:0005618 TAS cell wall
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006952 IEA defense response
GO:0008284 IEA positive regulation of cell proliferation
GO:0019731 IDA antibacterial humoral response
GO:0042581 IEA specific granule
GO:0042742 TAS:IEA defense response to bacterium
GO:0042995 IEA cell projection
GO:0044130 IEA negative regulation of growth of symbiont in host
GO:0044140 IDA negative regulation of growth of symbiont on or near host surface
GO:0045766 IEA positive regulation of angiogenesis
GO:0050829 IEA defense response to Gram-negative bacterium
GO:0050830 IDA defense response to Gram-positive bacterium
GO:0051701 TAS interaction with host
GO:0051873 IDA killing by host of symbiont cells
GO:0070062 IDA extracellular vesicular exosome
GO:0071222 IEA cellular response to lipopolysaccharide
GO:0071224 IEA cellular response to peptidoglycan
GO:0071347 IEA cellular response to interleukin-1
GO:0071354 IEA cellular response to interleukin-6
GO:0071356 IEA cellular response to tumor necrosis factor
GO:0090382 TAS phagosome maturation

Homologs

No Homologs available.

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