C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like domain containing CTD phosphatase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000296786 UBLCP1-001 ENSG00000164332 9606 + 5:159263081-159286040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000296786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000296786 5.775±0.00 6.067±0.00 1.878±0.00 7.722±0.35 4.384±1.77 2.935±0.09 2.703±1.59 4.207±3.15 3.905±1.50 2.429±0.71 2.297±0.00 6.605±2.86 7.004±2.79 9.658±6.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087L CIL_00087L_0001 VISTA 5:158759112-159360490
CIL_0008X2 CIL_0008X2_0001 VISTA 5:158781834-159383129
CIL_0008O4 CIL_0008O4_0001 VISTA 5:158790777-159391906

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004721 IEA phosphoprotein phosphatase activity
GO:0005515 IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0005730 IDA nucleolus
GO:0016311 IEA dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102795 Ublcp1-004 protein_coding Mus_musculus 0 1223
ENSMUST00000118481 RP23-478B14.1-001 processed_pseudogene Mus_musculus 0 1125
ENSMUST00000136709 Ublcp1-001 processed_transcript Mus_musculus 0 603
ENSMUST00000156551 Ublcp1-002 processed_transcript Mus_musculus 0 401
ENSMUST00000150032 Ublcp1-006 processed_transcript Mus_musculus 0 390
ENSMUST00000129054 Ublcp1-005 processed_transcript Mus_musculus 0 255
ENSMUST00000151875 Ublcp1-003 processed_transcript Mus_musculus 0 255

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