C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium modulating ligand
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297156 CAMLG-001 ENSG00000164615 9606 + 5:134738501-134752160 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000297156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000297156 11.358±0.00 5.098±0.00 1.817±0.00 8.642±1.96 5.753±2.50 7.565±4.68 1.663±1.11 4.240±0.00 2.371±1.16 5.025±2.29 6.077±4.78 8.835±5.51 3.615±2.83 24.007±7.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0001 VISTA 5:134136326-134739629
CIL_0007JT CIL_0007JT_0002 UCNEbase 5:134524545-135264654
CIL_00062W CIL_00062W_0002 CGP 5:134648789-134752160
CIL_0009AP CIL_0009AP_0001 VISTA 5:134719818-135321709
CIL_0005XR CIL_0005XR_0001 CGP 5:134738501-134855133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001881 IEA receptor recycling
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0006952 TAS defense response
GO:0007165 TAS signal transduction
GO:0007173 IEA epidermal growth factor receptor signaling pathway
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016032 IEA viral process
GO:0050839 IEA cell adhesion molecule binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021963 Caml-001 protein_coding Mus_musculus 0 893
ENSMUST00000169228 Caml-003 retained_intron Mus_musculus 0 551

Loading