C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: charged multivesicular body protein 4C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000297265 CHMP4C-001 ENSG00000164695 9606 + 8:81732434-81759515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartKidneyLiverLungOvaryPlacentaTestisENST00000297265
Transcript ID Bladder Breast Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000297265 2.234±0.00 1.587±0.00 1.535±0.00 3.329±2.77 1.208±0.09 2.170±0.00 13.067±8.94 7.042±2.22 1.133±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NB CIL_0003NB_0001 CGP 8:81693607-81732903
CIL_0004UZ CIL_0004UZ_0001 CGP 8:81701334-81759515
CIL_00071W CIL_00071W_0001 CGP 8:81732434-81842866

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IEA endosome
GO:0005829 TAS cytosol
GO:0007034 IEA vacuolar transport
GO:0009838 IMP abscission
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0016032 TAS viral process
GO:0016197 TAS endosomal transport
GO:0019058 TAS viral life cycle
GO:0030496 IDA midbody
GO:0031565 IMP cytokinesis checkpoint
GO:0032466 IMP negative regulation of cytokinesis
GO:0042803 IPI protein homodimerization activity
GO:0050792 IMP regulation of viral process
GO:0061024 TAS membrane organization
GO:0070062 IDA extracellular vesicular exosome
GO:0090543 IDA Flemming body
GO:1902188 IMP positive regulation of viral release from host cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029049 Chmp4c-001 protein_coding Mus_musculus 0 660

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