C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: anaphase promoting complex subunit 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299381 ANAPC16-001 ENSG00000166295 9606 + 10:72216048-72235860 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungOvaryENST00000299381
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Ovary
ENST00000299381 10.300±0.00 1.640±0.00 5.886±0.00 8.858±0.00 5.695±0.00 3.604±0.00 4.684±0.00 8.623±4.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007VS CIL_0007VS_0001 VISTA 10:71953326-72556599
CIL_0000Q0 CIL_0000Q0_0002 CGP 10:72096032-72235860
CIL_0000Q3 CIL_0000Q3_0002 CGP 10:72216000-72276036

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005680 IDA anaphase-promoting complex
GO:0005737 IDA cytoplasm
GO:0007067 IEA mitotic nuclear division
GO:0016567 IEA protein ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182898 Anapc16-001 protein_coding Mus_musculus 0 486
ENSMUST00000182152 Anapc16-005 protein_coding Mus_musculus 0 444
ENSMUST00000020307 Anapc16-002 protein_coding Mus_musculus 0 444
ENSMUST00000182912 Anapc16-004 protein_coding Mus_musculus 0 263
ENSMUST00000182116 Anapc16-006 protein_coding Mus_musculus 0 259
ENSMUST00000183093 Anapc16-007 retained_intron Mus_musculus 6e-20 104
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.0000003 62

Loading