C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 4, regulatory subunit 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000304338 PPP4R4-001 ENSG00000119698 9606 + 14:94174312-94279735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000304338
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000304338 0.021±0.00 0.055±0.00 0.025±0.00 5.217±0.21 0.047±0.00 0.029±0.00 0.002±0.00 0.054±0.00 1.101±0.00 0.076±0.00 0.010±0.00 0.897±0.70 0.268±0.13 2.193±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000597 CIL_000597_0002 CGP 14:94146128-94293271

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0008287 IDA protein serine/threonine phosphatase complex
GO:0019888 IDA protein phosphatase regulator activity
GO:0032515 IDA negative regulation of phosphoprotein phosphatase activity
GO:0080163 IDA regulation of protein serine/threonine phosphatase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021631 Ppp4r4-001 protein_coding Mus_musculus 0 3328
ENSMUST00000189871 Ppp4r4-002 nonsense_mediated_decay Mus_musculus 0 2892
ENSMUST00000187155 Ppp4r4-003 protein_coding Mus_musculus 0 2813
ENSMUST00000190664 Ppp4r4-005 protein_coding Mus_musculus 0 876
ENSMUST00000190151 Ppp4r4-004 protein_coding Mus_musculus 0 318

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