C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 2 (stretch responsive muscle)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000307518 ANKRD2-202 ENSG00000165887 9606 + 10:97572499-97583882 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000307518
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000307518 0.029±0.00 0.417±0.00 0.113±0.00 0.283±0.03 0.175±0.02 43.244±38.06 3.484±0.00 0.092±0.00 48.583±18.33 0.062±0.00 0.101±0.03 5.209±5.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006H8 CIL_0006H8_0001 CGP 10:97498868-97583884
CIL_0004VG CIL_0004VG_0001 CGP 10:97572499-97612802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000791 ISS euchromatin
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005829 IDA cytosol
GO:0006936 NAS muscle contraction
GO:0007517 NAS muscle organ development
GO:0008307 NAS structural constituent of muscle
GO:0030016 IEA myofibril
GO:0030017 IEA sarcomere
GO:0031432 IEA titin binding
GO:0031674 ISS I band
GO:0035914 IEA skeletal muscle cell differentiation
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043422 IPI protein kinase B binding
GO:0045662 IMP negative regulation of myoblast differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026172 Ankrd2-201 protein_coding Mus_musculus 0 1027

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