C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LEM domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000308330 LEMD3-001 ENSG00000174106 9606 + 12:65169571-65248327 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308330
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308330 3.987±0.00 5.190±0.00 1.178±0.00 4.737±0.93 3.823±0.39 3.778±0.00 2.485±0.90 3.265±1.95 2.048±0.24 4.997±0.00 1.619±0.91 4.710±0.30 2.561±0.38 8.180±1.69

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0001525 IEA angiogenesis
GO:0002044 IEA blood vessel endothelial cell migration involved in intussusceptive angiogenesis
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005635 IEA nuclear envelope
GO:0005637 IDA nuclear inner membrane
GO:0005639 IEA integral component of nuclear inner membrane
GO:0006997 IEA nucleus organization
GO:0016020 TAS membrane
GO:0016021 IDA integral component of membrane
GO:0030512 IDA negative regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0032926 IDA negative regulation of activin receptor signaling pathway
GO:0035914 IEA skeletal muscle cell differentiation
GO:0051726 IEA regulation of cell cycle
GO:1903053 IEA regulation of extracellular matrix organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119944 Lemd3-001 protein_coding Mus_musculus 0 4061
ENSMUST00000119093 Lemd3-002 protein_coding Mus_musculus 0 2248

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