C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tigger transposable element derived 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309880 TIGD3-001 ENSG00000173825 9606 + 11:65354767-65357613 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309880
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309880 0.051±0.00 0.230±0.00 1.037±0.72 0.105±0.00 0.027±0.00 0.093±0.00 0.264±0.00 0.046±0.03 0.156±0.00 0.158±0.00 0.486±0.24 0.184±0.07 4.384±1.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W1 CIL_0008W1_0001 VISTA 11:65187233-65790923

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000055911 Tigd3-201 protein_coding Mus_musculus 0 1395

Loading