C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GLE1 RNA export mediator
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000309971 GLE1-002 ENSG00000119392 9606 + 9:128504700-128542288 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000309971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000309971 6.242±0.00 6.864±0.00 2.202±0.00 3.073±1.14 5.220±1.89 4.552±2.25 3.288±0.00 9.247±0.00 3.907±1.67 3.274±0.53 5.798±3.29 8.931±3.35 6.243±1.30 27.743±6.26

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007EC CIL_0007EC_0001 CGP 9:128455186-128542288
CIL_0007EB CIL_0007EB_0001 CGP 9:128504700-128633665

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005643 IEA nuclear pore
GO:0005737 IDA cytoplasm
GO:0005886 IDA plasma membrane
GO:0006406 TAS mRNA export from nucleus
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016973 IEA poly(A)+ mRNA export from nucleus
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000019859 Gle1-001 protein_coding Mus_musculus 0 2004
ENSMUST00000164487 Gm6189-001 processed_pseudogene Mus_musculus 0 1589
ENSMUST00000118868 Gm11470-001 processed_pseudogene Mus_musculus 0 1286
ENSMUST00000142024 4933401B06Rik-002 processed_transcript Mus_musculus 0 1064
ENSMUST00000139758 4933401B06Rik-001 transcribed_processed_pseudogene Mus_musculus 0 1062

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