C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, MYM-type 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000314425 ZMYM3-002 ENSG00000147130 9606 - X:71239624-71254140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000314425
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000314425 2.348±0.00 3.951±2.33 2.128±0.00 2.589±0.00 2.692±0.00 5.972±0.00 1.247±0.87 1.000±0.00 18.847±13.95 3.143±1.69 3.675±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00057Q CIL_00057Q_0001 CGP X:71215194-71255146
CIL_00067U CIL_00067U_0001 CGP X:71239624-71301168

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 TAS DNA binding
GO:0005634 IEA nucleus
GO:0007010 IMP cytoskeleton organization
GO:0007275 TAS multicellular organismal development
GO:0008270 IEA zinc ion binding
GO:0022604 IMP regulation of cell morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121520 Zmym3-003 protein_coding Mus_musculus 0 6017
ENSMUST00000063577 Zmym3-001 protein_coding Mus_musculus 0 5849
ENSMUST00000117901 Zmym3-002 protein_coding Mus_musculus 0 5040
ENSMUST00000120107 Zmym3-013 protein_coding Mus_musculus 0 3376
ENSMUST00000120201 Zmym3-008 protein_coding Mus_musculus 0 2137
ENSMUST00000119699 Zmym3-005 protein_coding Mus_musculus 0 2013
ENSMUST00000121429 Zmym3-004 protein_coding Mus_musculus 0 1991
ENSMUST00000137416 Zmym3-012 processed_transcript Mus_musculus 0 1707
ENSMUST00000117637 Zmym3-007 protein_coding Mus_musculus 0 1147
ENSMUST00000129586 Zmym3-018 retained_intron Mus_musculus 0 1031
ENSMUST00000118092 Zmym3-006 protein_coding Mus_musculus 0 1002
ENSMUST00000141895 Zmym3-009 retained_intron Mus_musculus 0 815
ENSMUST00000155040 Zmym3-014 processed_transcript Mus_musculus 0 617
ENSMUST00000147017 Zmym3-015 processed_transcript Mus_musculus 0 553
ENSMUST00000129561 Zmym3-010 retained_intron Mus_musculus 0 540
ENSMUST00000143159 Zmym3-011 retained_intron Mus_musculus 0 453
ENSMUST00000134005 Zmym3-016 protein_coding Mus_musculus 0 385
ENSMUST00000129545 Zmym3-017 retained_intron Mus_musculus 0 337

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