C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UNC homeobox
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000316333 UNCX-001 ENSG00000164853 9606 + 7:1232907-1237318 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyPlacentaTestisENST00000316333
Transcript ID Bladder Brain Kidney Placenta Testis
ENST00000316333 0.087±0.00 0.064±0.00 1.753±0.00 0.062±0.00 0.210±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0001 VISTA 7:925518-1526682
CIL_0008DL CIL_0008DL_0001 VISTA 7:928196-1529533
CIL_0002HD CIL_0002HD_0002 CGP 7:1152071-1237318
CIL_0007K8 CIL_0007K8_0001 UCNEbase 7:1226268-1298099
CIL_0002H6 CIL_0002H6_0002 CGP 7:1232907-1459502

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001502 IEA cartilage condensation
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007389 IEA pattern specification process
GO:0010468 IEA regulation of gene expression
GO:0021516 IEA dorsal spinal cord development
GO:0021889 IEA olfactory bulb interneuron differentiation
GO:0035726 IEA common myeloid progenitor cell proliferation
GO:0043565 IEA sequence-specific DNA binding
GO:0045595 IEA regulation of cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031523 Uncx-201 protein_coding Mus_musculus 0 1764
ENSMUST00000172997 Uncx-001 protein_coding Mus_musculus 0 1764
ENSMUST00000174792 Uncx-002 protein_coding Mus_musculus 0 678

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