C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000319769 B4GALT3-001 ENSG00000158850 9606 - 1:161171310-161177485 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000319769
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000319769 16.623±0.00 5.429±0.00 2.004±0.00 4.127±1.30 15.082±0.00 3.741±2.23 6.269±5.91 7.313±0.00 15.148±14.40 11.574±0.00 12.713±5.26 21.609±6.88 10.972±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0003831 IEA beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
GO:0003945 IEA N-acetyllactosamine synthase activity
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0008378 TAS galactosyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0018146 TAS keratan sulfate biosynthetic process
GO:0018279 TAS protein N-linked glycosylation via asparagine
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0042339 TAS keratan sulfate metabolic process
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111313 B4galt3-001 protein_coding Mus_musculus 0 1855
ENSMUST00000064272 B4galt3-002 protein_coding Mus_musculus 0 1855
ENSMUST00000126699 B4galt3-003 processed_transcript Mus_musculus 0 1657
ENSMUST00000129985 B4galt3-004 retained_intron Mus_musculus 0 1616
ENSMUST00000132890 B4galt3-005 retained_intron Mus_musculus 0 885
ENSMUST00000155083 Ppox-002 retained_intron Mus_musculus 0 749
ENSMUST00000151863 B4galt3-008 processed_transcript Mus_musculus 0 725

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