C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 543
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000321545 ZNF543-001 ENSG00000178229 9606 + 19:57320509-57330776 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000321545
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000321545 1.595±0.00 2.163±0.00 0.680±0.00 1.408±0.07 1.815±0.03 0.906±0.22 0.849±0.09 0.731±0.23 1.000±0.61 0.992±0.16 0.970±0.62 1.261±0.67 0.568±0.08 1.640±0.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186475 protein_coding Mus_musculus 1e-21 110
ENSMUST00000187028 nonsense_mediated_decay Mus_musculus 1e-21 110
ENSMUST00000060444 Zfp3-001 protein_coding Mus_musculus 4e-17 95
ENSMUST00000091508 Zfp872-201 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000178901 Zfp872-001 protein_coding Mus_musculus 0.000000000000002 90
ENSMUST00000121178 Gm14229-001 processed_pseudogene Mus_musculus 0.00000000000002 86
ENSMUST00000109128 Zfp2-001 protein_coding Mus_musculus 0.0000000007 71
ENSMUST00000116378 Zfp2-002 protein_coding Mus_musculus 0.0000000007 71
ENSMUST00000109129 Zfp2-005 protein_coding Mus_musculus 0.0000000007 71
ENSMUST00000006903 Zfp184-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000102978 Zfp184-002 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000176580 Zfp184-001 nonsense_mediated_decay Mus_musculus 0.00000003 66
ENSMUST00000176511 Zfp184-004 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000034382 Zfp90-201 protein_coding Mus_musculus 0.00000003 66
ENSMUST00000109922 Gm14124-001 protein_coding Mus_musculus 0.0000001 64
ENSMUST00000109914 Zfp345-001 protein_coding Mus_musculus 0.000005 58

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