C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EH-domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322054 EHD3-001 ENSG00000013016 9606 + 2:31234337-31269447 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000322054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000322054 0.926±0.00 2.288±0.00 1.545±0.00 12.547±4.63 1.485±0.00 1.140±0.00 0.927±0.00 4.455±0.33 3.722±3.09 2.041±0.00 0.861±0.00 1.407±0.81 3.976±0.53 1.317±1.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VD CIL_0000VD_0001 CGP 2:31234337-31414715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 TAS nucleic acid binding
GO:0003924 IEA GTPase activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI:IEA protein binding
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005634 TAS nucleus
GO:0005737 ISS cytoplasm
GO:0005886 IEA plasma membrane
GO:0005925 IDA focal adhesion
GO:0006184 IEA GTP catabolic process
GO:0007596 TAS blood coagulation
GO:0010008 TAS endosome membrane
GO:0030139 IEA endocytic vesicle
GO:0032456 IDA endocytic recycling
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051260 IPI protein homooligomerization
GO:0055038 IDA recycling endosome membrane
GO:0072661 IGI protein targeting to plasma membrane
GO:0086036 IGI regulation of cardiac muscle cell membrane potential

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024860 Ehd3-001 protein_coding Mus_musculus 0 2002

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