C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactory receptor, family 52, subfamily D, member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000322641 OR52D1-001 ENSG00000181609 9606 + 11:5488685-5489749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000322641
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000322641 0.104±0.00 1.038±0.00 0.268±0.00 1.035±0.00 1.062±0.00 0.094±0.07 0.103±0.00 0.794±0.00 0.973±0.90 0.965±0.00 0.085±0.02 2.689±2.59

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0001 VISTA 11:4975331-5576811
CIL_0003R8 CIL_0003R8_0002 CGP 11:5248083-5645789
CIL_0004CP CIL_0004CP_0001 CGP 11:5268345-5505617

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0004984 NAS olfactory receptor activity
GO:0005886 TAS plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007608 NAS sensory perception of smell
GO:0016021 NAS:IEA integral component of membrane
GO:0050911 IEA detection of chemical stimulus involved in sensory perception of smell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098182 Olfr646-001 protein_coding Mus_musculus 0 1005
ENSMUST00000098210 Olfr584-001 protein_coding Mus_musculus 5e-16 90
ENSMUST00000098212 Olfr582-201 protein_coding Mus_musculus 0.00000000000002 84

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