C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SUMO1/sentrin specific peptidase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323460 SENP5-001 ENSG00000119231 9606 + 3:196867856-196934714 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323460
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323460 1.954±0.00 3.301±0.00 0.635±0.00 5.322±0.00 2.445±0.19 1.344±0.40 0.528±0.06 1.507±0.90 2.411±0.99 0.590±0.06 0.806±0.42 3.163±1.32 1.322±0.21 7.602±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070W CIL_00070W_0002 CGP 3:196867856-196942597

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005730 IDA nucleolus
GO:0006508 IEA proteolysis
GO:0007049 IEA cell cycle
GO:0008234 IEA cysteine-type peptidase activity
GO:0016925 TAS protein sumoylation
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0043687 TAS post-translational protein modification
GO:0044267 TAS cellular protein metabolic process
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023457 Senp5-001 protein_coding Mus_musculus 0 3049
ENSMUST00000144320 Senp5-002 retained_intron Mus_musculus 0 1978
ENSMUST00000129900 Senp5-003 protein_coding Mus_musculus 0 1808
ENSMUST00000155515 Senp5-004 nonsense_mediated_decay Mus_musculus 0 787
ENSMUST00000077549 Prss43-201 protein_coding Mus_musculus 0.0000000003 73

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