C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MIF4G domain containing
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000325102 MIF4GD-002 ENSG00000125457 9606 - 17:75266228-75271218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyTestisENST00000325102
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Testis
ENST00000325102 15.379±0.00 14.958±0.00 11.111±0.00 12.627±0.00 11.571±0.00 12.328±0.00 12.662±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PW CIL_0008PW_0001 VISTA 17:75051738-75652852
CIL_0007I1 CIL_0007I1_0001 CGP 17:75236599-75266373
CIL_0003KI CIL_0003KI_0002 CGP 17:75261674-75271227
CIL_0007IU CIL_0007IU_0001 CGP 17:75266228-75289510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006417 IEA regulation of translation
GO:0008022 IPI protein C-terminus binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106507 Mif4gd-004 protein_coding Mus_musculus 0 935
ENSMUST00000021087 Mif4gd-001 protein_coding Mus_musculus 0 933
ENSMUST00000146244 Mif4gd-008 processed_transcript Mus_musculus 0 778
ENSMUST00000137304 Mif4gd-002 processed_transcript Mus_musculus 0 736
ENSMUST00000142637 Mif4gd-010 processed_transcript Mus_musculus 0 520
ENSMUST00000148574 Mif4gd-005 protein_coding Mus_musculus 0 514
ENSMUST00000106506 Mif4gd-006 protein_coding Mus_musculus 0 512
ENSMUST00000124407 Mif4gd-003 processed_transcript Mus_musculus 0 377
ENSMUST00000127132 Mif4gd-007 processed_transcript Mus_musculus 0 315

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